Microbiome Bioinformatics Pipelines

Fostering continuous integration with Snakemake workflow engine

General overview of mothur bioinformatics pipeline

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Example report workflow

Useful links

https://github.com/wclose/mothurPipeline

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Last updated on January 10, 2023.

These microbiome workflows are continuously being reviewed, integrated, tested and are maintained by Teresia Mrema-Buza.
Github_Repo: https://github.com/tmbuza/imap-mothur.
Github_Page: https://tmbuza.github.io/imap-mothur/.
Visit the CDI website for more practical user guides (…in progress).